Name: ChIP-seq Analysis and Visualization Using Galaxy
Start: 2016-08-23T14:00:00-07:00
End: 2016-08-23T17:00:00-07:00
Location: M1-A303

ChIP-seq Analysis and Visualization Using Galaxy

fredhutch.io is an initiative to facilitate education about and promote access to computational resources at the Fred Hutchinson Cancer Research Center. It was started byErick MatsenandBrian Claywelland funded through and reviewed by the Public Heath Sciences division.

fredhutch.io

This course will be an introduction to ChIP-seq experiment analysis and visualization using Galaxy. No prior Galaxy experience is required. By working through the tutorial, attendees will learn how to use Galaxy to perform basic analysis and visualization of a ChIP-seq experiment, including:
<UL>
<LI>Fetching data from public sources</LI>
<LI>Aligning reads with Bowtie2</LI>
<LI>Assessing experiment quality</LI>
<LI>Building a signal track</LI>
<LI>Visualizing protein binding across genes</LI>
</UL>
 
Attendees must bring a laptop to the course. Please be sure your laptop can connect to the Marconi on-campus wireless network prior to the class.

M1-A303

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ChIP-seq Analysis and Visualization Using Galaxy

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ChIP-seq Analysis and Visualization Using Galaxy

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