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2018 User Group Meeting - Paris

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Date and Time

Location

Location

Institut Pasteur

Technology Core of the Center for Translational Science Cytometry and Biomarkers UTechS

25-28 Rue du Dr Roux

75015 Paris

France

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Event description

Description

This will be a highly informative, action-packed event including both 10x and customer speakers, software demos, poster sessions, and evening dinner/entertainment. Please note there will be a substantial prize (consumables!) for the best poster (as selected by the 10x team) – if you are interested in displaying your work please email a 1-page summary, including author affiliations, to: scott.brouilette@10xgenomics.com .

Current agenda:

Thursday 13th September

11:00 – 12:30 - REGISTRATIONS & LUNCH

12:30 – 12:40 - Welcome & introduction - Annika Branting, Regional Marketing Manager,
10x Genomics & Valentina Libri, Institut Pasteur

12:40 – 13:05 - 10x Technology & applications - Kamila Belhocine, Staff Scientist, 10x Genomics

13:05 – 13:25 - Single-cell network interference as a new approach to better characterise auto-inflammatory disease - Mickael Ménager, Lab Director, Team Atip-Avenir, Institut Imagine - Inserm

13:25 – 13:50 - Immune profiling with single cell genomics - Stephen Hague, Technical Sales Specialist, 10x Genomics

13:50 – 14:05 - RNA in the time of Tinder: Matching TCR with transcriptome of CD4 T cells from NSCLC patients - Jimena Tosello, Post-doc, Translational Immunotherapy Team, Institut Curie

14:05 – 14:25 - Long DNA molecule sequencing by 10X Chromium technology for de novo assembly & chromosome level scaffolding of plant genomes - Mohamed Zouine, Assoc. Prof., GBF Lab, Toulouse INP-ENSAT

14:25 – 14:40 - Duchenne muscular dystrophy phenotype during myogenic differentiation - Virginie Mournetas, Post-doc, I-Stem, Paris

14:40 – 15:40 - REFRESHMENTS & BOOTHS - ROOM 06
15:00 - 15:30 - SOFTWARE DEMOS (AMPHITHEATER DUCLAUX)

15:40 – 16:00 - Improving genome assemblies of non-human & highly complex plant & metagenomic samples - Sven Warris, Bioinformatics Researcher, Wageningen University And Research Centre

16:00 – 16:20 - Single cell analyses of CD8+ T cells in Suv39h1 KO mice in response to immunotherapy - Paul Gueguen, Unit of Immunity & Cancer, Institut Curie

16:20 – 16:40 - A Single cell transcriptomic approach to better understand cardiac valve development and diseases - Michel Puceat, Team Leader, Development & Physiopathology of the Cardiovascular System, Marseille Medical Genetics, Inserm

16:40 – 16:55 - Multiplexing: Increasing sample throughput while optimising SC experimental design on 10X - Fabiola Curion, Wellcome Centre for Human Genetics, Oxford University

16:55 – 17:15 - Transcriptional dynamics of monocytes to Influenza virus infection - Mary O'Neil, Postdoctoral Researcher, Human Evolutionary Genetics, Institut Pastuer

17:15 – 17:20 - Day 1 Wrap Up - Annika Branting, Regional Marketing Manager,
10x Genomics & Valentina Libri, Institut Pasteur

19:30 - Late - Dinner and River Cruise (Registration Required)

Friday 14th September

08:45 – 08:50 - Welcome back - Annika Branting, Regional Marketing Manager, 10x Genomics & Valentina Libri, Institut Pasteur

08:50 – 09:15 - Interrogating Chromatin Accessibility and Regulatory Landscape at Single Cell Resolution - Anushka Brownley, Product Manager, 10x Genomics

09:15 – 09:35 - Using linked-reads & targeted capture to phase clinically-relevant loci - Susan L Kloet, Team Leader, Leiden Genome Technology Centre

09:35 – 09:55 - Single cell RNA sequencing: Standards & Applications - Holger Heyn, Team Leader, Single Cell Genomics, CNAG, Barcelona

09:55 – 10:05 - 10x Support: Resources & updates - Magdalena Nawara, 10x Genomics

10:05 – 10:25 - Improving genome reconstruction from human gut metagenomic samples using 10X Genomics - Francesco Strozzi, Bioinformatics Manager, Enterome, Paris

10:25 – 11:25 - REFRESHMENTS & BOOTHS - ROOM 06
10:45 – 11:15 - SOFTWARE DEMOS (AMPHITHEATER DUCLAUX)

11:25 – 11:40 - Single cell RNAseq data analysis using a collaborative, extendable shiny app - Bernd Jagla, PhD, Biomarker Discovery Platform, UtechS CB & Hub de Bioinformatique et Biostatistiques, C3BI Institut Pasteur

11:40 – 12:00 - Phenotype moulding of stromal cells in the lung tumour microenvironment - Bernard Thienpont, Assistant Professor, Faculty of Medicine, KU Leuven

12:00 – 12:20 - Single cell nanopore RNA sequencing with the 10x Genomics Chromium and the MinIon - Rainer Waldmann, IPMC - CNRS

12:20 – 12:30 - BioLegend Overview - Jean-Baptiste Guillerme, PhD, Technical Application Scientist, BioLegend France SAS

12:30 – 12:40 - Methods for sample preparation for single cell analysis of solid tumours - Jana Soyka, Sr. Global Product Manager, Miltenyi Biotec

12:40 – 13:00 -
Charting the diversification of mammalian cells at whole organism scale - Jonathan Griffiths, CRUK Cambridge Institute, Cambridge

13:00 – 13:20 - LINNAEUS: A strategy for massively parallel single cell transcriptome profiling & CRISPR/Cas9-based lineage tracing - Nina Mitic, PhD Student, Junker Lab, Max Delbrück Centre for Molecular Medicine, Berlin

13:20 – 13:30 -
Thanks & close - Annika Branting, Regional Marketing Manager, 10x Genomics & Valentina Libri, Institut Pasteur

Be sure to reserve your spot now by clicking on the Register button, and tell your colleagues about it!

The 10x Team


Date and Time

Location

Institut Pasteur

Technology Core of the Center for Translational Science Cytometry and Biomarkers UTechS

25-28 Rue du Dr Roux

75015 Paris

France

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