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MICROBIAL GENOMICS PRO SUITE HANDS-ON WORKSHOP

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NTNU, room 301 in "Grønnbygget", 3rd floor

Richard Birkelands vei 3B

7034 Trondheim

Norway

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QIAGEN BIOINFORMATICS MICROBIAL GENOMICS PRO SUITE HANDS-ON WORKSHOP
Please join our workshop if you are interested in NGS based microbiology. We will be working with OTU clustering, functional metagenomics and NGS-based typing. We will be using the CLC Genomics Workbench and several modules to the program and tutorial data during the day and you will get a license that will work 6 weeks after the workshop so you have time to work with your own data.

This is organized together with SINTEF and NTNU

Program

08:30 – 08:35 Welcome

08:35 – 09:30 General workbench overview and data import

09:30 – 10:30 OTU clustering

10:30 - 10:45 Coffee break (included coffee and tea)

10:45 - 11:30 Introduction to metadata and databases

11:30 - 12:15 Lunch break (not included)

12:15 – 13:30 NGS-based Typing

13.30 – 13.45 Coffee break (included coffee/tea and choclate)

13:45 – 14:15 NGS-based Typing, continued

14:15 – 14:45 Whole Metagenome Analysis

14:45 – 15:00 Wrap-up

Prerequisite: bring your own laptop

There is a limit of 20 people for the workshop and registration will be on a first come, first served basis.
Participants will get a 6 weeks demo license after the workshop for the CLC Genomics Workbench, Microbial Genomics Module , CLC Genome Finishing Module (not used in this workshop) and MetaGeneMark plug-in.

Hope to meet you there!

QIAGEN BIOINFORMATICS

Link to CLC Genomics Workbench: https://www.qiagenbioinformatics.com/products/clc-genomics-workbench/
Link to CLC Microbial Genomics Module: https://www.qiagenbioinformatics.com/products/clc-microbial-genomics-module/
Link to CLC Genome Finishing Module: https://www.qiagenbioinformatics.com/products/clc-genome-finishing-module
Link to MeteGeneMark plug-in: https://www.qiagenbioinformatics.com/plugins/metagenemark/



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Date and Time

Location

NTNU, room 301 in "Grønnbygget", 3rd floor

Richard Birkelands vei 3B

7034 Trondheim

Norway

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