MICROBIAL GENOMICS PRO SUITE HANDS-ON WORKSHOP
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MICROBIAL GENOMICS PRO SUITE HANDS-ON WORKSHOP

MICROBIAL GENOMICS PRO SUITE HANDS-ON WORKSHOP

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Realfagsbygget, 4th floor, Auditorium 4

Allegaten 41

5020 Bergen

Norway

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QIAGEN BIOINFORMATICS MICROBIAL GENOMICS PRO SUITE HANDS-ON WORKSHOP
Please join our workshop if you are interested in NGS based microbiology. We will be working with OTU clustering, functional metagenomics and NGS-based typing. We will be using the CLC Genomics Workbench and several modules to the program and tutorial data during the day and you will get a license that will work 6 weeks after the workshop so you have time to work with your own data.

This is organized together with Centre for Geobiology at the University of Bergen.

Program

09:30 – 09:45 Qiagen Bioinformatics overview – Sample to Insight

09:45 – 10:30 General workbench overview and data import

10:30 – 11:00 OTU clustering

11:00 - 11:15 Coffee break (included coffee and tea)

11:15 - 12:00 OTU clustering continued

12:00 - 12:45 Lunch break (not included)

12:45 – 14:00 NGS-based Typing

14.00 – 14.15 Coffee break (included coffee/tea and choclate)

14:15 – 15:00 NGS-based Typing, continued

15:00 – 15:45 Whole Metagenome Functional Analysis

15.45 – 16.00 Wrap-up

Prerequisite: bring your own laptop

There is a limit of 20 people for the workshop and registration will be on a first come, first served basis.
Participants will get a 6 weeks demo license after the workshop for the CLC Genomics Workbench, Microbial Genomics Module , CLC Genome Finishing Module (not used in this workshop) and MetaGeneMark plug-in.

Hope to meet you there!

QIAGEN BIOINFORMATICS

Link to CLC Genomics Workbench: https://www.qiagenbioinformatics.com/products/clc-genomics-workbench/
Link to CLC Microbial Genomics Module: https://www.qiagenbioinformatics.com/products/clc-microbial-genomics-module/
Link to CLC Genome Finishing Module: https://www.qiagenbioinformatics.com/products/clc-genome-finishing-module
Link to MeteGeneMark plug-in: https://www.qiagenbioinformatics.com/plugins/metagenemark/



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Location

Realfagsbygget, 4th floor, Auditorium 4

Allegaten 41

5020 Bergen

Norway

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