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Ste že kdaj razmišljali, da bi svoje biološke podatke obdelovali sami?
Želite izgubiti strah pred črnim zaslonom in ukazno vrstico?
Želite nadgraditi svoje znanje bioinformatike?
BioBash Workshop je 3-dnevna delavnica namenjena študentom, podoktorskim študentom in ostalim raziskovalcem s področja ved o življenju, ki bi radi obdelovali svoje biološke podatke. Namen delavnice je seznanitev z osnovnimi splošnimi informatičnimi orodji (Linux, ukazna vrstica, regularni izrazi), seznanitev z nekaterimi bioinformatičnimi orodji (analiza surovih zaporedij sekveniranja, poravnava zaporedij, sestavljanje genoma, filogenetsko drevo) ter diskusija glede uporabe pridobljenih znanj na lastnih problemih.
Delavnica s podnaslovom Foundation je namenjena začetnikom, ki bi se radi podali v svet bioinformatike. Zahtevano računalniško predznanje za udeležbo na delavnici je le, da udeleženec prepozna, ali je računalnik prižgan.
Vsebina delavnice: 1. dan:
Uvod v Linux: namestitev, datotečni sistemi
Ukazna vrstica Linux
Regularni izrazi
Uvod v programiranje v jeziku Python
2. dan:
Teoretične osnove NGS
Praktične vaje iz NGS:
Quality Control,
"Trimming",
Sestavljanje sekvenc,
Poravnava sekvenc na referenčni genom,
Vizualizacija posameznih korakov
3. dan:
Praktične vaje BLAST:
Postavitev lokalnih baz
Iskanje v lokalnih bazah z različnimi algoritmi BLAST
Predstavitev paketov BioPython in R
Diskusija o analitičnih problemih udeležencev, vprašanja in odgovori
Kotizacija za 3-dnevno delavnico znaša:
350 € + DDV za prijave pred 31. 12. 2014
410 € + DDV za prijave po 31. 12. 2014
V ceno delavnice so všteti prigrizki in dva topla obroka.
Delavnica bo izvedena, v kolikor bo prisotnih vsaj 10 udeležencev, sprejeli pa bomo največ 25 ljudi.
Delavnica bo potekala v slovenščini.
Oddana rezervacija je veljavna 8 dni, prijava pa je potrjena s plačilom kotizacije. V kolikor boste imeli težave s plačilom v 8 dneh, nas prosim kontaktirajte na info@genialis.com. Do vključno 12. 1. 2015 sprejemamo morebitne odpovedi in omogočamo vračilo kotizacije. Po tem datumu je v primeru odpovedi možno vračilo 50 % plačane kotizacije.
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